Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQDIHARSATTTPMPSVRNQEEVAKLIDVSKCIGCKACQVACSEWNELRDEVGHNHGTYDNPMDLTADSWTVMRFTEHENEAGNLEWLIRKDGCMHCAEPGCLKACPSPGAIVKYANGIVDFNQDKCIGCGYCITGCPFDIPRISQKDHKAYKCSLCSDRVSVGMEPACVKTCPTGAIVFGSKEDMKE------HAAERIVDLKSRGYENAGLYDPEGVGGTHVMYVLHHADKPSLYAGLADQPSVSPLVSLWKGVTKPLALLAMGATVLAGFFHYVRVGPNRADDEEDHGQAEAPVHQVDPSVHTFDPHERR |
| 2VPY Chain:F ((5-166)) | -------------------------AMAIDLSLCVGCAACAVACKMENEVPPGV--------------FNLWIRER---EVGEYPNLVVEFRPEQCLHCENPPCVPVCPT-GASYQTKDGLVLVDPKKCIACGACIAACPYDA-RYLHPAGYVSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDVLR------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56552 for 1079 contacts (-52.4/contact) +
2D Compatibility (PS) -16299 + (NN) -7536 + (LL) 6696
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -87341.0 ( -80.95 by residue)
QMean score : 0.263
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