Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCA--PQRQA-FAVVKANAYGHGAREVVTALHDD-ADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFL---AAGLDIPLNVWLKLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQ---LESFLGLLDLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAG----LSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 3E6E Chain:B ((7-371)) | -RPTRLHIDTQAITEN--VQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILIL-SVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHL-QGFTVLVNGKRCEIVGRVCMDQCMIRLAE--EVPVGPVVTLVGKDGNEENTLQMVAEKLETIHYEVACTFSQRIPREYN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242980 for 2939 contacts (-82.7/contact) +
2D Compatibility (PS) -37215 + (NN) -7589 + (LL) 488
1D Compatibility (HY) -24400 + (ID) 6500
Total energy: -318196.0 ( -108.27 by residue)
QMean score : 0.444
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