Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDVELGEHEAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDPAMDSEHCGRCSACLDICPTAAFVGPY---RLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCD------DCQIVCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEWALRRHGET |
| 1RGV Chain:A ((4-59)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INDDCTACDACVEECPNEAITPGDPIYVIDPTKCS------------------------ECVGAFDEPQCRLVCPADCIP--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28734 for 264 contacts (-108.8/contact) +
2D Compatibility (PS) -4837 + (NN) -1460 + (LL) 20560
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -18771.0 ( -71.10 by residue)
QMean score : 0.345
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