Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGE-DSYDLPAEFLRVHSPSAEVQGHGN-PVLQYGKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
2L6P Chain:A ((2-124))
MRIPSAIQLHKASKTLTLRYGEDS-YDLPAEFLRVHSPSAEVQGHGNPVLQY-GKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
General information:
TITO was launched using:
RESULT:
Template:
2L6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32909 for 781 contacts (-42.1/contact) +
2D Compatibility (PS) -13111 + (NN) -6982 + (LL) 64
1D Compatibility (HY) -15600 + (ID) 5800
Total energy: -74338.0 ( -95.18 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_2L6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6P-query.scw
PDB file :
Tito_Scwrl_2L6P.pdb
: