Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3C3I Chain:D ((2-131))
-SSLLVK----KLVESATTPMRGSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPD-GTYGRIAPRSGLAYKYGIDV--LAGVIDSDYRGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSDTAR-----------
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101421 for 859 contacts (-118.1/contact) +
2D Compatibility (PS) -14113 + (NN) -5192 + (LL) -332
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -132708.0 ( -154.49 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: