Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVSALVVDDAPFIRDLMKKGLRD-NFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQAGVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRLPQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA |
| 3RVL Chain:B ((12-131)) | ------LVVDDFSTMRRIVRNLLKELGFN--NVEEAEDGVDALNKLQAGGYGFVISDWDMPNMDGLELLKTIRADGAMSALPVLMVTARAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79296 for 904 contacts (-87.7/contact) +
2D Compatibility (PS) -12920 + (NN) -8974 + (LL) 11256
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -102684.0 ( -113.59 by residue)
QMean score : 0.696
|
|
|