Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYTNAD----GSGLYWDLLKQVYAPYGLDVKFIN-MPWNRANKLMTAGS--M--VDGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKTP--FSGR---ASLTGKRVGWRHSYNLIPAEQR----DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI-AQLPP-G-KESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 2Q88 Chain:A ((6-244)) | ----------------------------------LEELKEQGFARIAIANEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAITAGLFMKP--ERCAAVAYSQ-PILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDLVSKAN--DPNVEVLAPVEGAPVYCDGAAFRKGD--EALRDAFDVELAKLKESGEFAKIIEPYGFSAKA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51798 for 1761 contacts (-29.4/contact) +
2D Compatibility (PS) -23377 + (NN) -3157 + (LL) 3144
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: -79088.0 ( -44.91 by residue)
QMean score : 0.460
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