Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGNYSSATEFFLLGFPGSQEVCRILFATFFLLYAVTVMGNVVIIITVCVDKCLQSPIYFFLGHLCVLEILITSTAVPFMLWGLLLPSTQIMSLTACAAQLYLYLSLGTLELALMGVMAVDRYVAVCNPLRYNIIMNSSTFIWVIIVSWVLGFLSEIWPVYATFQLTFCKSSVLDHFYCDRGQLLKVSCEDTLFREFILFLMAVFIIIGSLIPTIVSYTYIISTNLKIPSASGWRKSFSTCASHFTYVVIGYGSCLFLYVKPK
2RH1 Chain:A ((40-236))
----------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILM-KMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH----QEAINCYA----EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTK
General information:
TITO was launched using:
RESULT:
Template:
2RH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187746 for 1383 contacts (-135.8/contact) +
2D Compatibility (PS) -19460 + (NN) -2371 + (LL) 1480
1D Compatibility (HY) -12400 + (ID) 1700
Total energy: -222197.0 ( -160.66 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_2RH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RH1-query.scw
PDB file :
Tito_Scwrl_2RH1.pdb
: