Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTESSLLRSLGLSPGPGSSEVELDCWFDEDFKFILLPVSYAVVFVLGLGLNAPTLWLFIFRLRPWDATATYMFHLALSDTLYVLSLP---TLIYYYAAHNHWPFGTEICKFVRFLFYWNLYCSVLFLTCISVHRYLGICHPLRALRWGRPRLAGLLCLAVWLVVAGCLVPNLFFVTTSNKGTTVLC-HDTTRPEEFDHYVHFSSAVMGLLFGVPCLVTLVCYGLMARRLYQPLPGSAQSSSRLRSL-RTIAVVLTVFAVCFVPFHITRTIYYLARLLEADCRVLNIVNVVYKVTRPLASANSCLDPVLYLLTGDKYRRQLRQLCGGGKPQPRTAASSLALVSLPEDSSCRWAATPQDSSCSTPRADRL |
| 4EA3 Chain:B ((132-407)) | -----------------------------------------YLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILL----GFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA-----EIECLVEIPTPQDYWGPV-FAICIFLFSFIVPVLVISVCYSLMIRRL--------EKDRNLRRITRLVLVVVAVFVGCWTPVQ----VFVLAQGLGVQPSSETAVAIL-RFCTALGYVNSCLNPILYAFLDENFKACFRKF--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258033 for 1939 contacts (-133.1/contact) +
2D Compatibility (PS) -25740 + (NN) -6174 + (LL) 4260
1D Compatibility (HY) -27200 + (ID) 4400
Total energy: -317287.0 ( -163.63 by residue)
QMean score : 0.284
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