Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP |
1MN4 Chain:A ((63-325)) | -----FKVGPPFELVRDYCPVVESHTGR----------------TLDLRIIPRIDRGFDHIDEE----------WVGYKRSYFTLVSTFETANCDLDTFLKS--------SFDLLVEDSSVEGRLRVQYFAIKIKAKNDDDDTEINLVQHTPSVCPLV-------------------PSPLPKHQIIREASNV-RNITKMKKYDSTFYLHRDHVNYEE-----------YGVDSLLFSYPEDSIQKVARYERVQFASSISVK-KPSQQNK------------------HFSLHVILGAVVDPDG---IPYDELALKNGSKGMFVYLQEMK---------------TPPLIIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145360 for 1841 contacts (-79.0/contact) +
2D Compatibility (PS) -26348 + (NN) -4357 + (LL) 9928
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -174187.0 ( -94.62 by residue)
QMean score : 0.263
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