Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSH---RSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISPSIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELHPQETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIRGYLSAFTQPACPRVSPVKRASQAILLLVSFVFTYWVDFTFSFSGGVTWINDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 2P62 Chain:A ((1-241)) | MRIKLIIVEGKTDESFFKVLLEKL------YGFREAKKLTPEFP------IGKWGFRIGEHPLVLEKDNIALVIIHAEGKQRIPKVLKSVLDSVKLGLLNVEEVYVVRDVDEGNDVFEWVL------------------------------------SFLREREVRVDNGAIVTE---GVKIYPYGMGNLTLNEPFVKEKKELELSLAYLAKL---------------------DGILEKY---------RGSMRALSQDKGDKLT-----PKDVMHILSIANDYTGD-----------------------------CLSGLYEKYIGIMIHRNRELL-IRFLSEVNLLPLLERMVG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253243 for 1873 contacts (-135.2/contact) +
2D Compatibility (PS) -25777 + (NN) -11209 + (LL) 10080
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -294449.0 ( -157.21 by residue)
QMean score : 0.310
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