Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVR-EGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFV-----DGIASKIHLHSYSLSLKLPN-NKKITITAPLPEHIKKSIEALHTPF |
| 1V9K Chain:A ((3-227)) | ---------------------------------------------------------------------------------------VIMYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERY-----------------------------------------------------------------------------------AFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKMRNAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98746 for 1742 contacts (-56.7/contact) +
2D Compatibility (PS) -23901 + (NN) -7889 + (LL) 11568
1D Compatibility (HY) -12000 + (ID) 3400
Total energy: -134368.0 ( -77.13 by residue)
QMean score : 0.488
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