Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLE----NSMRLGVNDYFKEVFIPYEELSEVELRSKKAAMRRKCFPGYVFLYVDLCDEVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCNALYNAQET-----KKLSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIEVSILGKPTIIELDLAQVEKIED |
| 2LQ8 Chain:A ((2-177)) | -----------------------------------------------------------------------------------------------AMKKKWYIVLTMSGYEEKVKENIEKKVEATGI---------KNLVGRIVIPI--RGGQR-RKSEKLFPGYVFVEMIMNDEAYNFVRSVPYVM---GFVSSGGQPVPVKDREMRPILRLAGLEEYEEKKKPVKVELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96312 for 1195 contacts (-80.6/contact) +
2D Compatibility (PS) -18054 + (NN) -4120 + (LL) 8508
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -123378.0 ( -103.25 by residue)
QMean score : 0.522
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