Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILLTRPLSDSLNTRSTLKKYGYKVYIEPAFTIKHLQPDI------S-AYKFDVVISTSKNSVKAFSQI-C--------RVDDLPIITVGNSTMQTAKDSGFSDIISADSNVEGLISFVKNYYSRAVKFLYIRGQEVSCDLKKRLSEEGFNVREVILYKTIIKRGLTNRCKNLLLGGRINSVAFFSSQTARIFCSLVLKSGLS--NVMDNITAYAMSKNIVDSLKPIKWKKIITSRLPTQENLIDIINKDC |
| 3D8T Chain:A ((33-281)) | TMRIAYAGLR-RKEEFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRELAQGVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTSKSLLPLLPQG--RGVAALQLYGK-PLPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVKPFYVDETERLGSLLQGFKRAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103943 for 1964 contacts (-52.9/contact) +
2D Compatibility (PS) -24200 + (NN) -2145 + (LL) 140
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -138648.0 ( -70.59 by residue)
QMean score : 0.482
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