Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFT-----FDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNH----IDNLIM--------RILDVVFAIP-SLLLAVAIIASFGASIPNLIIALSIGNIPSFART-MRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLET-HSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH-- |
| 4OCV Chain:A ((24-378)) | TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGK------------ETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYN----LVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAA---------DELGR----AAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGAS-------TALEDERDLDKVHFSTELFRAYTEGFVGELR----DSITAREAELLPFSGNLLTMECGMRFLADYLE------------------------GDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -360717 for 2608 contacts (-138.3/contact) +
2D Compatibility (PS) -33144 + (NN) 1023 + (LL) 3852
1D Compatibility (HY) -6000 + (ID) 2950
Total energy: -397936.0 ( -152.58 by residue)
QMean score : 0.156
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