Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRS-QDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELIPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWA----NQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVS---MMDTHATTREG---KYAGQERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK |
| 3KRU Chain:D ((13-326)) | -----------------ITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCN---ISYEDVVGPSPIK----AGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPE--NKPIFV--RVSADDYMEGGINIDMMVEYINMIKD-KVDLIDVSSGGLLNVDINLYPGYQVKYA-----ETIKKRCNIKTSAVGL--ITTQELAEEILSNERADLVALGRELLRNPYWVLHTYTSKED------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133878 for 2652 contacts (-50.5/contact) +
2D Compatibility (PS) -32567 + (NN) -13747 + (LL) 2840
1D Compatibility (HY) -20800 + (ID) 5350
Total energy: -203502.0 ( -76.74 by residue)
QMean score : 0.542
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