Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHGKGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRFIQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAMGWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFITSLPQRHVVPNEGRSVLSGVVIDLDKEGKTKHIERILINDDHPFSTF
2Z06 Chain:D ((1-218))
MRVLFIGDVMAEPGLRAVGLHLPDIRDRYD--LVIANGENAARGKGLDRRSYRLLREAGVDLVSLGNHAWDHKEVYALL-ESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE--EKADYVLVEVHAEATSEKMALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGTYHSIIGGEVETFLARFLTGRPQ------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117223 for 1822 contacts (-64.3/contact) +
2D Compatibility (PS) -23952 + (NN) -12516 + (LL) 2364
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -175777.0 ( -96.47 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_2Z06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z06-query.scw
PDB file :
Tito_Scwrl_2Z06.pdb
: