Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIMFFGTRDYEKEMALNWGKKNNVEVTTSKELLSSATVDQLKDYDGVTTMQFGKLEND-VYPKLESYGIKQIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQTHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLD-FLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYFTNDWTNKDIDDKTLL----ELIEHERILVTPHIAFFSDEAVQNLVEGGLNAALSVINTGTCETRLN |
| 4PRL Chain:B ((2-320)) | --KIAVFSPSESERKLVAATEKKFGCELKLIDESLSAENVDQVADCDGVLLKPLGNLDDEIVYKKLADYGIKSIGLRIVGTNTIDFDLAKKYHLTVTNVPVYSPRAIAEMAVTQAMYLNRKIGEFKANMDKGDFTNPDSLISNEIYNKTIGLIGVGHIGSAVAQIFSAMGAKVLAYDVIYNPEVEPYLTYAD-FDTVLKEADIISLHTPLLKSTENMIGKKQFAEMKNDAILINAARGELVDTAALIEALEKHEIAAAGLDTLAHESSYFF-----KKVDDAQIPADYKKLAAMPNVIVTPHSAYFTKTSVRNMIEISLRDTIALAN--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209000 for 2523 contacts (-82.8/contact) +
2D Compatibility (PS) -33702 + (NN) -10411 + (LL) 544
1D Compatibility (HY) -26800 + (ID) 5950
Total energy: -285319.0 ( -113.09 by residue)
QMean score : 0.555
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