Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQV--------VIHLVFVCSALLTAVTNNIAFSQKERH--------------------------------------------------------------------------------------------------------------------------- |
| 3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESIPAGEVELDFNLPETIAKPFADTVTSVGDRIQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYYDETPIPAHMSGALGIIG------------HMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTW-----NLDCSKLVWADHSSLSMIKRLASEKISQLVKQRYRVTDAQGHVYSVSMPQLTDQALPDYYDSIPDVAPNSDQLRVLTAALQMSLAQFRNDELPHDEDRSDLLTTLDLLYADGAYEISALRDQFELLMARYTTDFKWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78480 for 916 contacts (-85.7/contact) +
2D Compatibility (PS) -15716 + (NN) -2205 + (LL) 1852
1D Compatibility (HY) 4000 + (ID) 1500
Total energy: -92049.0 ( -100.49 by residue)
QMean score : 0.141
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