Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEMRKIAFNAPKAFSLEHEGVVLEGEIVRVGAKLFRLKARLKGELMLICDTSGKEFKKSLDESLVLHISDGLWDTQSQSLDFDNLDVIESFNGFIDLSEILRSEVESIKLDYHYAD
4PS2 Chain:A ((1-79))
----EESISLTFRNMNDFTPEQVARQIPRLKAMLAMRSLLRDLKANLL-----DNVTFRKELEKILRDP----------------------------ALSQTLRDELRALVPEKAW--
General information:
TITO was launched using:
RESULT:
Template:
4PS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15599 for 454 contacts (-34.4/contact) +
2D Compatibility (PS) -8157 + (NN) -977 + (LL) 2328
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -25605.0 ( -56.40 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_4PS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PS2-query.scw
PDB file :
Tito_Scwrl_4PS2.pdb
: