Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGCSFIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQQPVQTHERMTTSSEHVTPLDFNYPVHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNVQDKKKIFSVLDLKGWVGILEDLKMNLKDPNSPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAITYTYTSTNNASGGFNSSKSVIHENLDKNREDAIHKILNRMYAVVMKKAVTELTKENIAKYRDAIDRMKGFKSSMPQKK |
| 2QUP Chain:A ((24-76)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVSFSEVM---GKQRDEKAYERLQALMSKIDDQ-GKLLSETRTIEELRKYKELVKEFVGDAVELGLRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -999 for 254 contacts (-3.9/contact) +
2D Compatibility (PS) -5838 + (NN) -2407 + (LL) 14672
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 3878.0 ( 15.27 by residue)
QMean score : 0.513
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