Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQN-KD-GKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRIYASNNRNDK-YKFIAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTI-QDSSALIQWENNPSPKIATYAVYRFEANSKTP--LRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 3R8Q Chain:A ((1-263)) | ------------------------------------------------------------------------------------------------------------------------------------------AIPAPTDLKFTQVTPTSLSAQWTPPN-VQLTGYRVRVTPKEKTGPMKEI-NLA-PDSSSVVVSGLMVATKYEVSVYALKDTL-TSRPAQGV-VTTLENVSPPRRARVTDATETTITISWRTKT-ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV-----VIDASTAIDAPSNLRFLATTPNSLLVSWQPPR-ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQ-KSEPLIGRKKT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4078 for 1814 contacts (2.2/contact) +
2D Compatibility (PS) -27630 + (NN) -9946 + (LL) 9112
1D Compatibility (HY) -2400 + (ID) 1900
Total energy: -28686.0 ( -15.81 by residue)
QMean score : 0.320
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