Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDFLEDYKKSVLERKSEGIPPLPLNAKQVEAVVEILMKDPTNAAFAKELLIHRVSPGVDEGAKVKAEFLAQLSQKKLECPHISALEATTLLGTMLGGYNVEPLIVGLESQDKNIAKESAKALKTTLLVYGSFDKIAAMSKTNALAKEVLESWANAEWFLNKEPLNECIEACVFKIDGETNTDDLSPASDAFTRSDIPLHAKAMLKNRIENYEQRIEAIKTKGVPVAYVGDVVGTGSSRKSATNSIMWHFGKDIPFVPNKRSGGIVIGGVIAPIFFATCEDSGALPIVADVKDLKEGDIIKIYPYKGEITLNDKVVSTFKLEPETLLDEVRASGRIPLIIGRGLTNKARKFLGLGESEAFKKPSAPKSDAKGYTLAQKIVGHACGVKGILPGAYCEPKVTTVGSQDTTGAMTRDEVKELA---SLK-FDAPFV------LQSFCHTAAYPKPSDVSL---------------HATLPGFITQ-RGGVA-LHPGDGVIHTWLNR-----------MGLPDTLGTGGDSHTRFPLG---ISFPAGSGLVAFAAVTGTMPLNMPESVLVRFKGEMNPGITLRDLVNAIPYYAIKKGLLTVEKKGKINVFNGRILEIE--GLPDIKMEQAFELSDASAERSAAACVVRLNKEPMIEYLKSNIKLIDEMIASGYEDKETLKKRRDAMQAWVDKPVLL----EPDSNAQYAAVIEIDVAEITEPILACPNDPDDVATLSEVLADTTG--------------------------------KRPHAIDEVFIGSCMTN-IGHFRAFGEIVK------NAPPS-QARLWVVPPSKMDEQELINEGYYAIFGAAGARTEVPGCSLCMGNQARVRD--------NA---VVFSTSTRNFDNRMGR-GAKVYLGSAELGAACALLGRIPTKEEYMNLVSEKLESQKDKIYRYMNFNLMENFRL |
| 2B3Y Chain:A ((58-568)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIENILHWNVT---QHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFL-KWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPD-SLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTI----TKHL--------RQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVS-ITYLVQT----------GRDEE-----KLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTV-VPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149630 for 3565 contacts (-42.0/contact) +
2D Compatibility (PS) -44197 + (NN) -21181 + (LL) 26864
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -208944.0 ( -58.61 by residue)
QMean score : 0.323
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