Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLR----------SLD---KKPWNVAYVAPSRRP----TDG-RYGENPNRLGSYY---------------------QFQVVIKPSPSNIQELYLK----------SL-EVLGINLNEHDIRF-VEDNWESPT-LGAWGLGWEVWLD----------GMEVTQFTYFQQV----GG-IPCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 1YFS Chain:A ((2-239)) | SLSAHEIRELFLSFFEKKGHTRVKSAPLVPE-N--DPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTS---RHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDDEEAYRIWNEHIGI-PSERIWRLGEEDNFWQMGDVGPCGPSSEIYVDRGEEYEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEIDIIFPLIQFGEEVSGKKYGEKFETDVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRAMRFGYKLGIENPFLYKGVDLVVDIMKEPYPELELSREFVKGIVKGEEKRFIKTLKA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66425 for 1090 contacts (-60.9/contact) +
2D Compatibility (PS) -18219 + (NN) -8191 + (LL) 444
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -100041.0 ( -91.78 by residue)
QMean score : 0.309
|
|
|