Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNHDLESIKQAALIEYEVREQGSSDVLDSNISKEPLEFIIGANQIIVGLEKAVLKAQIGEWEEIVIAPEEAYGVYESGYLQEVPRDQF-EGIELEKGMSVFGQTEDNQTIQATIKDFSNTHVMVDYNHPLAGKTLAFRFKVLGFREVSEEEILASHHDSGTGCCGGHGGHGGKKGGGCGCSCSHG
4ODO Chain:C ((10-144))
-------TIRYTLQVEGEVLDQGE------------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREATPEELLHGHAHPSGH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4ODO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57043 for 818 contacts (-69.7/contact) +
2D Compatibility (PS) -14075 + (NN) 1572 + (LL) -460
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -79106.0 ( -96.71 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_4ODO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ODO-query.scw
PDB file :
Tito_Scwrl_4ODO.pdb
: