Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLYLENGLFLQAQSFGASGTQVGELVFNTSMSGYQEVISDPSYKGQFVVFSMPEIGVVGANPKDDESFFSCAGVLARHYNEFFSNSRADSSLSTYLKKRGVLGISGVDTRSLIKTLRHHGCLMMIASTIEHDRNKLEEVLKNAPKISHSPLVSSVSTPKIITHQRATFDFNTLDYKPFDEKIPHKIIAVLDFGAK--GNILNELQNVGLKALIYPHHTKANELIKAYEKKEISGIFLSNGPGDPLSL-QQEIGEIKRLINAKIPMFGICLGHQLLSIAQGYPTYKLKFGHHGSNHPVKNLE-------TNAVEITAQNHNYCVPEEIEE-IATITHRNLFDNTIEGVRYKNAPIISVQHHPESSPGPKESHYIFKEFVGLLEGF |
| 2A9V Chain:A ((12-201)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMLKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDIDSSEL-D-----GLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGK-TKVSVMHSENIFGGLPSEITVWENHNDEIIN--LPDDFTLAASS-ATCQVQGFYHKTRPIYATQFHPEVEHTQ-YGRDIFRNFIGICASY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58647 for 1521 contacts (-38.6/contact) +
2D Compatibility (PS) -19262 + (NN) -5537 + (LL) 12032
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -80714.0 ( -53.07 by residue)
QMean score : 0.525
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