Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNGEKVDFFLALWRFVLWVLSMGLLVGFVAPFIFKFFLHDKFSSTHIEIIKEEI |
1L4A Chain:E ((49-76)) | ------ERRKEKHRKMEEEREEMRQTIRDKYGLK---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 606 for 113 contacts (5.4/contact) +
2D Compatibility (PS) -3003 + (NN) -1969 + (LL) 11672
1D Compatibility (HY) 400 + (ID) 300
Total energy: 7406.0 ( 65.54 by residue)
QMean score : 0.442
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