Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHS-QRV-SSVTKYWEDSSSVTINAFFTNQDENETFHMEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEWINKQTSLLRKNIIFKETSTHDDILVRLSNLQEFNVALRDSFFDKRRIITALLRSN--KVDSDTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL |
| 3NVO Chain:A ((38-263)) | -------------------------DSQHPCWLHLNYTHPDSARWLASTP-LLPNNVRDALAGESSRPRVSRMGEGTLITLRCI---------LVAMRLYMDERFIVSTRQRKVLALDDVVSDLQEGT-GPVDCGGWLVDVCDALTDHASEFIEELHDKIIDLEDN----Q-I--P-PRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDHRRRMQDIADRLGRGLDEIDACIARTGIMADEIAQVMQES----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89553 for 1541 contacts (-58.1/contact) +
2D Compatibility (PS) -22094 + (NN) -5434 + (LL) 9408
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -112823.0 ( -73.21 by residue)
QMean score : 0.442
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