Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPESNLKSLGAKTPYIFEYNSDLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGVIFIRYIPKDKMVESKSLKLYLFSYRNHGSFHESCINTILLDLVQLLEPKYLEVYGD-----FVSRGGIAIKPFVNYAIKEYQDFKEKRLLDAK
1WUR Chain:A ((92-186))
---------------------------------EGSEMVVVKGVEFYSMCEHHLLPFFGKVHIGYIPDGKILGLSKFARIVDMFARRLQVQERLAVQIAEAIQEVLEPQGVGVVVEGVHLCMMMRGVEKQHSRTVTSAMLGVFRENQKTREEF
General information:
TITO was launched using:
RESULT:
Template:
1WUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58151 for 603 contacts (-96.4/contact) +
2D Compatibility (PS) -9519 + (NN) -2910 + (LL) 1044
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -76536.0 ( -126.93 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1WUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WUR-query.scw
PDB file :
Tito_Scwrl_1WUR.pdb
: