Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MKFFLLKKF---------------------SEFLNTQTHFNLKRLNASSFLLETFSKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKILQANVIDNDRILEI----KGAKDLAYKS--ETFILRLEMIPK-----KANLMILDQEKCVIEAFRFNDRVAKND---ILGALPPNIYEHQEEDLDFKGLL-DILEKDFLSYQHKELEHKKNQIIKRLNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKECMIEIDKSMPLN-AFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVRDAAEESVLEMFMPVKNSKIK--------RPMN--GYEVLYYK---DFKIGLGKNQKENIKLLQDA---RANDLWMHVRDIPGSHLIVFCQK----------------NTPKDEVIMELAKMLIK-MQKDAFNGYEIDYTQRKFVKII--KGAHVIYSKYRTISLKDT---- |
| 3WMT Chain:A ((18-522)) | SFQAECESFKAKINVTNANVHSVTYVPAGVNISMADNPSICGGDPITSTFAFCRIALNVTTSSKSQIFMEAWLPSNYSGRF-LSTGNGGLGGCVKYDDMAYAAGYGF--------ATVGTNNGHFGNNGVSFYQNTEVVEDFAYRALHTGVVVGKELTKNFYPQGYNKSYYLGCSTGGRQGWKSVQTFPDDFDGVVAGAPAFNFINLTSWGARFLTLTGDSSAETFVTETQWTAVHNE---IIRQCDSLDGAKDGI--IEDPDLCQPIIEALLCNATQSSTSGTCLTGAQVKTVNGVFS---------ATYGLNGSFLYPRMQPGSELAAYSSYYSGTPFAYAEDWYRYVVFNNTNWDVATWTVQDAAIANAQDPYQISTWNGDLSPFQKKGGKVLHYHGMEDAIIS-SESSKVYYKHVADTMNLSPSELDSFYRFFPISGM-AHCANADGPSAIGQGTGTFAGNNPQDNVLLAMVQWVEEGVAPDFVRGAKLNGSTVEYRRKHCKYPKRNRYVGPGSYTDENAWECV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72460 for 3423 contacts (21.2/contact) +
2D Compatibility (PS) -42552 + (NN) -3227 + (LL) 1892
1D Compatibility (HY) -5600 + (ID) 3350
Total energy: 19623.0 ( 5.73 by residue)
QMean score : 0.161
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