Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSK-PI---DQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRF-Y--FHSLYFRESNGILIELATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 3B59 Chain:A ((4-259)) | SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQG---ADEHHVVQLRR--------ADENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGA---KRDLA----RWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG----DFMCFLRCN-SAHHRIAILPG---------PPCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVDF---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3B59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122075 for 2116 contacts (-57.7/contact) +
2D Compatibility (PS) -27577 + (NN) -12660 + (LL) 2816
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -169046.0 ( -79.89 by residue)
QMean score : 0.477
|
|
|