Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKSERLNDMMLFLNDKNVFQLSDIMTKYDISRSTAIRDVKSLEEIGMPIYS--ERGRNGHYQVLRNRLLSPIVFNIDEVFALYFSMLTLKAYETTPFHLSVEKLKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDVILQFTMEEKVCQINYDKKGIEKTYVVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILELEENHAFEAKKLTDLKSETDYLYKKKDAINFEVEIASNGVDLFFKENYPSMKLNQEQGRNVIRGFYNRGEEPFIINYLLGFGDKINMVQPDSLKEMLLNELKSLQNHLQKLS |
2HTJ Chain:A ((5-61)) | ---------ILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWFLKG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26521 for 357 contacts (-74.3/contact) +
2D Compatibility (PS) -5690 + (NN) 82 + (LL) 20228
1D Compatibility (HY) -800 + (ID) 650
Total energy: -13351.0 ( -37.40 by residue)
QMean score : 0.496
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