Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKA----AGIEEFTVAEIEMIPQNDIQL------SGEDLEKFERLIDALEDLEDVQKVYHNVELED |
| 2LQJ Chain:A ((151-227)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------VRVICRPKAETYVRAHIVQRTSSND-ITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29242 for 415 contacts (-70.5/contact) +
2D Compatibility (PS) -7446 + (NN) -3024 + (LL) 9656
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -31856.0 ( -76.76 by residue)
QMean score : 0.488
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