Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQ--ETLDGLECCIVALTGKISVSEGDHVFSEIGTRANVFEKIPTDSVFISGGRAFQVKADA-EKARVALCYSPADRN---LPTTL-IKASDNSIEQRGKYQNKRLVHNILPDVSEVASSLLVVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEG-YHPVGVPDGYD-SYYLNVMAGPKRVWEFHNDPDHEWILERD |
| 1SEF Chain:A ((60-258)) | ------------------------------ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQETH-EL-------EA--GGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPLAGHQPYKVVGSIHDQQPEEYE-GMTDVLLWSLLPKE--FDFDMNMHILSFEPGA-SHAYIETHVQE---------HG-AYLI---SGQGMYNLDN------EWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKDA-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96669 for 1496 contacts (-64.6/contact) +
2D Compatibility (PS) -20769 + (NN) -2901 + (LL) 3996
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -120793.0 ( -80.74 by residue)
QMean score : 0.416
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