Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
2L35 Chain:A ((1-62))
----------CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRLGTAEV--LGIISIVLVATVLKTIVLIPFLEQ-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12753 for 295 contacts (43.2/contact) +
2D Compatibility (PS) -6428 + (NN) 51 + (LL) 2136
1D Compatibility (HY) -5600 + (ID) 700
Total energy: 2212.0 ( 7.50 by residue)
QMean score : -0.038
(partial model without unconserved sides chains):
PDB file :
Tito_2L35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L35-query.scw
PDB file :
Tito_Scwrl_2L35.pdb
: