Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPA--ETVEYLAVDMGALGDGQ--------TSDEYTVSICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 2FVG Chain:A ((2-335)) | -----------MYLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKN-----LKGVIGY--R-----------PPRFENLR--IDFGFSSADEAKK-YVSIGDYVSFVSDYIE-KNGRAVGKAFDDRAGCSVLIDVLESGVS----PAYDTYFVFTVQEE-----SAVVVEQLKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQMKRRT-------------YGVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEEGKI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141368 for 2492 contacts (-56.7/contact) +
2D Compatibility (PS) -31766 + (NN) -13177 + (LL) 2860
1D Compatibility (HY) -12800 + (ID) 2950
Total energy: -199201.0 ( -79.94 by residue)
QMean score : 0.441
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