Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATDNSAKVIKSISDN--RIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCLDTVQKT-NADLVLFTSYNVNQEGKMQYIKRDKGIKVLDAGPTPWNKFYQADLWKGSRFPVGYWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENVETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF |
2Z87 Chain:B ((374-502)) | --PLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92064 for 926 contacts (-99.4/contact) +
2D Compatibility (PS) -14179 + (NN) -7533 + (LL) 15812
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -112364.0 ( -121.34 by residue)
QMean score : 0.530
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