Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVE--HYSPGFL--QIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLE-FGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY |
| 3JVV Chain:B ((124-277)) | ----------------------------------------------------------------------------------------------------------------------------------------GLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH-RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108148 for 1001 contacts (-108.0/contact) +
2D Compatibility (PS) -14953 + (NN) -7722 + (LL) 15396
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -127677.0 ( -127.55 by residue)
QMean score : 0.564
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