Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLREREDKFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVVNDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPS-ANEIIIELDPGMAFGTGTHPTTQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENITLNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGIIEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE |
3GRZ Chain:B ((3-195)) | ---------------------------------------------------------------------------------------------------------------------YHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPGLAFG--NHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI-YDIALQKTSLLADVD-GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127793 for 1624 contacts (-78.7/contact) +
2D Compatibility (PS) -20979 + (NN) -12019 + (LL) 9564
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -170677.0 ( -105.10 by residue)
QMean score : 0.630
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