Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVEDFDFDLP-EELIAQTPLLDRTSSRLMVLDKESGDIKDQHFTDIISYLNEGDALVLNDTRVLP-ARLHGIKDETGAHIEVLLLKQKEGNAW-ETLVKPAKRIRK--GATITFGDGAL-KATCLEELEHGGRILEFSYE-GIFYEVLEQLG-----EMPLPPYIKEQLADQD--------------RYQTVYAKE-NG--------------SAAAPT---------AGLHFTEDLLEQISAKGVEII----------FVTLHVGLGTFRPVDVEDT--TNHKMH-SEFYRLTEESAERINKIKAQG------GKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQA-V----------------DALITNFHLPKSTLIMLVSALSDRTKILA-AYNHAVEEQYRFF-SFGDAMFIH-------- |
| 4QT9 Chain:A ((19-432)) | -----LSDDALMDTVQRRTFLYFWEGA-----EPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRG--------YVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIR-NPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYL-----AIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10463 for 2546 contacts (-4.1/contact) +
2D Compatibility (PS) -32611 + (NN) 2560 + (LL) 2984
1D Compatibility (HY) -4800 + (ID) 2800
Total energy: -45130.0 ( -17.73 by residue)
QMean score : 0.268
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