Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASKLDGNFDRMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYHAAIQAGAKLVMTAFNVVDGVPATMNKWLNRDVLRGEMD-FDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGKLSESLLDEAVLRMLHLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGVESAVLLENKNRLLPLAKETKIALVGPLASSP-DILGGWNVYGEEKDGINVETGLREVFETVEVISTEYTEFSDEDK---------------------VAVKAAV---QNMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLEKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEF---ELKTSSLPKELNLGEPLHVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVTFELTSEAFSFYNHQLEKVQEPGLHRIFVGTSSEDVDAFELEVGGYV |
| 3U4A Chain:A ((7-730)) | -----INALMAKMTLDEKIGQ-LNL-PGAGDITTGQASSSG-IAQKIK-----EGKVGGLFNIKSVTKIKEVQRIAVEESRLKIPLLFGMDVIHGYETAFPIPLGLSCTWDMELIEKSARIAAIEASADGICWTFSPMVDISRDPRWGRVSEGSGEDPYLGAQIAKAMVKGYQG---KDFSDNTSIMACVKHFALYGAGEAGRDYNTVDMSRVRMYNEYFPPYKAAVDAGVGSVMTSFNEIDGIPATGNKWLMTDVLRKRIGAFKGFVVTNYTAINEMIDHGMG-DLQTVSALALRAGVDMDMVGEGFLTTLKKSLQEGKITQAQIDAACKRILEAKYKLGLFSDPYKYCNEERARTQIFTPEHRKIAREIAAQSFVLLKNDNNVLPLKKSGTIALVGPLADNRVNMPGTWSVAAKHAESVSLLEGLKKAAGNDARILYAHGSNLDEDKSLIERATMFGKTLKYDPRPKDVVIKEAVDIANQADVIVAALGESAEMSGEASSRSNIEIPALQRELLQALLKTGKPVVLVLFTGRPLALTWEHENVPAILNVWFAGTEAGDAISDALFGVVNPSGKLSATFPRNVGQVPIYYNHKNTGRPLPEGQWFQKFRSNYLDVPNDPLYPFGYGLSFTKFTYGDLKLSS--TNLKGNQTLTASIELTNSGDYDGAEVVQLYIRDLVGSTTRPVKELKGFQKVFLKKGETKTITFKITPEDLKFYNYDLKYDWEPGEFVIMVGGNSRDLKS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256649 for 6462 contacts (-39.7/contact) +
2D Compatibility (PS) -74456 + (NN) -23576 + (LL) 1612
1D Compatibility (HY) -53200 + (ID) 15500
Total energy: -421769.0 ( -65.27 by residue)
QMean score : 0.449
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