Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCGHSVMIPRREFERKVKKILVKAEQE
3IRB Chain:A ((32-62))
---------------------AGEQFFNGLKQNKIIGSKCSKCGRIFVPARS----------------
General information:
TITO was launched using:
RESULT:
Template:
3IRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5747 for 161 contacts (-35.7/contact) +
2D Compatibility (PS) -3227 + (NN) -224 + (LL) 3420
1D Compatibility (HY) -400 + (ID) 400
Total energy: -6578.0 ( -40.86 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_3IRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IRB-query.scw
PDB file :
Tito_Scwrl_3IRB.pdb
: