Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDSL--VN-NIEPTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPNGSLIFPGKLRGEDSFGMLCSARELALPNA----PQVRGIIELSDQVIVGESFDANKHWKN
2RHQ Chain:B ((11-152))
---------------------------------------------------------------YVDA-GVKVEDLAERITRTGIEVDNMIDYSKDIKNLVVGYIQSKEKGSG----NICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLPGGIKIKRAKLRGERSEGMICSLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTALYLND
General information:
TITO was launched using:
RESULT:
Template:
2RHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74160 for 900 contacts (-82.4/contact) +
2D Compatibility (PS) -15241 + (NN) -10044 + (LL) 5192
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -100703.0 ( -111.89 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_2RHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHQ-query.scw
PDB file :
Tito_Scwrl_2RHQ.pdb
: