Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISVDGELRTRKY-EKDGQTHYITEV---LASSFQLLESRSQRAMRENNISGDLSDLVLEEEELPF
1EYG Chain:B ((7-114))
--NKVILVGNLGQDPEVRYMPNGGAVANITLATSESW------EQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLG----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36748 for 592 contacts (-62.1/contact) +
2D Compatibility (PS) -10552 + (NN) -2834 + (LL) 1804
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -58130.0 ( -98.19 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1EYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYG-query.scw
PDB file :
Tito_Scwrl_1EYG.pdb
: