Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHITTVVIWKILRCLSLVFGVSILTF--ILLKQSPVDPVMASVNYDTSLTPVQYKAIAHHYGLDKPAPVQYFIWLKNFIQGHLGTSLVYRQPVIDIIRSRAGASFILMGLSWVLSGLI---GFILGTLSAFHQGKLLDRIVRWFSYLQISVPTFWIGLIFLLIFSVQLG------WFPIGISSPIGTLSQDITLADRIKHLILPVFTLSILGIANVTLH------TRTKMMSVLSSEYVLFARARGETEWQIFKNHCLRNAIVPAITLHFSYFGELFGGSVLAEQVFSYPGLGSTLTEAGLKSDTPLLLA-IVMIGTLFVFAGNLIADILNSIINPQLRRKV |
| 4X2Z Chain:A ((9-309)) | QKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLAQKWN-------VQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLAEHFDADYTNAFLKKRVSCNCGIKSYELR---GLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATDGPATVD-----CDEDAVGTVVFVGSTNSGHCY--TQAAGQAFDNLAKDRKFGK-----KSPYITAMYT--RFAFKNETS------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306022 for 2160 contacts (-141.7/contact) +
2D Compatibility (PS) -29444 + (NN) 216 + (LL) 2324
1D Compatibility (HY) -2800 + (ID) 2600
Total energy: -338326.0 ( -156.63 by residue)
QMean score : 0.285
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