Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLGSIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDDSTYLGIVDGKGADLYALGKLLQEELGEQIAIGSSPQMLAKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNFLFVDELASIRDSCGSSK-QGKELWNEILQNLGLIARKGRQAGCHLLLSTQDPNAENIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVSDRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNILPNY |
3B9P Chain:A ((113-198)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPSIIFIDEVDSLLSER----EASRRLKTEFLVEFDGLP------RIVVLAATNRPQE--LDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNISAMRAITEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30730 for 393 contacts (-78.2/contact) +
2D Compatibility (PS) -8149 + (NN) -5202 + (LL) 24572
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -25359.0 ( -64.53 by residue)
QMean score : 0.323
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