Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQK-DGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGS-HYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYI-VKDQS-LNLSVSPLKGKIG-NNKDGLEY-LLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 1LST Chain:A ((2-234)) | -------------------------LPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRT-K---GVDVVAYA-N--QDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAF--AGPSVKDKKYFGDGTGVGLRKDD--TELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48195 for 1867 contacts (-25.8/contact) +
2D Compatibility (PS) -24848 + (NN) -11576 + (LL) 2776
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -93943.0 ( -50.32 by residue)
QMean score : 0.494
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