Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVK----VDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFH---AHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVP-YLDIIEEKLLGGDYN- |
| 4U4H Chain:A ((1-209)) | --MWSHPQFEKGSMELSYATTMHY--RDVVFYVTTDRNRAYFVCGGCVYSVGRPCPGEIAKFGLVVRGTGPDDRVVANYVRSELRQRGLDEVFLDSVCLLNPNVSSELDVINTNDVEVLDECLAEYCTSLRTSPGVLISGLRVRAQDRIIELFEHPTIVN------VSSHFVYTPSPYVFALAQAHLPRLPSSLEALVSGLFDGIPAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35366 for 1393 contacts (-25.4/contact) +
2D Compatibility (PS) -19782 + (NN) 208 + (LL) 696
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -62644.0 ( -44.97 by residue)
QMean score : 0.329
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