Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKQLLTQKYTNDVQQNSQKHFGYLTERMYSYRDKVLDKKPFIDAERAILVTEAYQKHQEKPNVLKRAYMLQNILEKMTIYIDDETMIVGNQASSDKDAPIFPEYTLEFVVNELDLFEKRDGDVFYITEETKEQIRN-IAPFWENNNLRARAGVMLPEEVQVYMETGFFGMEG----------KMNSGDAHLAVNYQKLLEEGLIGFEKKARKAKADLDLTKPESIDKYHFYDSILITIEAVKTYAERFAILAKK-QAKTANAKRRQELLDIASICERVPYYPAETFAEAVQSVWFIQCILQIESNGHSLSYGRFDQYMYPYVKSDLEAGRETEDSIVERLTNLWIKTITINKVRSQAHTFSSAGSPLYQNVTIGGQTRHKEDAVNPLSFLVLKSVAQTHLPQPNLTVRYHANLDKSFMNEAIEVMKLGFGMPAFNNDEIIIPSFIKKGVSEEDAYDYSAIGCVETAVPGKWGYRCTGMSYINFPKVLLITMNDGIDPASGKRFAPSYGHFTQMTSYKELKEAWDKTLRYLTRMSVIVENAIDISLEREV-PDILCSALTDDCIGRGKHLKEGGAVYDYISGLQV-GIANLSDSLAALKKLVFEEKRLTTLEVWQALQSDYAGPRGEEIRQMLINEAPKYGNDDDYADSLVRECYDVYVEEIAKYPNTRYGRGPIGGIRYS----GTSSISANVGQGRGTLATPDGRHAGTPLAEGCSPSHNMDKKGPTSVLKSVSKLPTDEIVGGVLLNQKVNPQTLAKEEDKQKLIALLRTFFNRLHGYHIQYNVVSRETLIDAQKHPEKHRDLIVRVAGYSAFFNVLSKATQDDIIARTEHAL |
5A0U Chain:F ((7-790)) | ------------------------LTPRMQRLRNHYLTVRPSVSIYRALAFTEVVKANPGMPTILLRAKAFRHACETAPILIQDDELIVGHPCGKPRAGAFSPDIAWRWVRDELDTMSTRPQDPFEISEADKKTIREEIVPFWEGRSLDEIC------EAQ-YREAGVWAFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMNGIKADAEAHLASLSMENPEDIDRIYYYKAAIETCEGVVNYARRIAAHARELAAKEQNAQRRAELLTIAEVNENVPANPPKTLQEALQSIWTVESLFEIEENQTGLSLGRVDQYCYPMFEADIREGRLTHDTALELLQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACRIHNQSPQKYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKSGRI-YQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLRDLRTFDEFDAAVKQQIAHIVRLSAI-GTVISQRVHRDVAPKPLMSLLVEGCMESGKDVAAGGAMVNHGPGLIFSGLATYVDSMAAIRKLVFEEKKYTLEQIRDALLANFEG--YEALRRDCLN-APKYGNDDNYVDQYALDITEWTEKECRKYK-----------MLYSTLSHGTLSISNNTPIGELTNATPNGRLAWMPLSDGISPTQGADKQGPTAIIKSVSKMNVETMNIGMVHNFKFLKGLLDTPEGRHGLITLLRT-ASILGNGQMQFSYVDNEVLKKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278869 for 7274 contacts (-38.3/contact) +
2D Compatibility (PS) -83780 + (NN) -46004 + (LL) 2040
1D Compatibility (HY) -53200 + (ID) 14200
Total energy: -474013.0 ( -65.17 by residue)
QMean score : 0.475
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