Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKYYLVLAEVSIFQTVWLIPREDGSIGWTDEIKQAKPFLSYEEAKNKTEAHMQSVFEFIASYKIIEFTKEELDNFLIPTS
2KJ9 Chain:A ((31-63))
-----------------------------------------YQRSVWTRLETYLFP---DIGNKDIAELDTGDLLVPIKKIE
General information:
TITO was launched using:
RESULT:
Template:
2KJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4414 for 153 contacts (-28.8/contact) +
2D Compatibility (PS) -3242 + (NN) 1325 + (LL) 4120
1D Compatibility (HY) 0 + (ID) 250
Total energy: -2461.0 ( -16.08 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_2KJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJ9-query.scw
PDB file :
Tito_Scwrl_2KJ9.pdb
: